home..
Pandas, Data Structures / Data Analysis
March 2024 (2224 Words, 13 Minutes)
Files To Get
Use wget in the _notebooks folder for this ipynb
wget https://raw.githubusercontent.com/nighthawkcoders/teacher_portfolio/main/_notebooks/2024-03-05-DS-python-pandas-df_science.ipynb
Use wget in a subfolder named files in your _notebookx folder on the following
wget https://raw.githubusercontent.com/nighthawkcoders/teacher_portfolio/main/_notebooks/files/data.csv
wget https://raw.githubusercontent.com/nighthawkcoders/teacher_portfolio/main/_notebooks/files/grade.json
Goto link and downlooad, then copy this png file and place into subfolder named data_structures in your images folder
https://github.com/nighthawkcoders/teacher_portfolio/blob/main/images/data_structures/pandas_dataframe.png
Pandas and DataFrames
In this lesson we will be exploring data analysis using Pandas.
- College Board talks about ideas like
- Tools. “the ability to process data depends on users capabilities and their tools”
- Combining Data. “combine county data sets”
- Status on Data”determining the artist with the greatest attendance during a particular month”
- Data poses challenge. “the need to clean data”, “incomplete data”
-
From Pandas Overview – When working with tabular data, such as data stored in spreadsheets or databases, pandas is the right tool for you. pandas will help you to explore, clean, and process your data. In pandas, a data table is called a DataFrame.
- DataFrame is a 2-dimensional labeled data structure with columns of potentially different types. It is similar to:
- a spreadsheet
- an SQL table
- a JSON object with rows [] with nexted key-values {}
# uncomment the following line to install the pandas library
# !pip install pandas
'''Pandas is used to gather data sets through its DataFrames implementation'''
import pandas as pd
Cleaning Data
When looking at a data set, check to see what data needs to be cleaned. Examples include:
- Missing Data Points
- Invalid Data
- Inaccurate Data
Run the following code to see what needs to be cleaned
# Read the JSON file and convert it to a Pandas DataFrame
# pd.read_json: a method that reads a JSON and converts it to a DataFrame (df)
# df: a variable that holds the DataFrame
df = pd.read_json('files/grade.json')
# Print the DataFrame
print(df)
# Additional print statements to understand the DataFrame:
# print(df.info()) # prints a summary of the DataFrame, simmilar to database schema
# print(df.describe()) # prints statistics of the DataFrame
# print(df.head()) # prints the first 5 rows of the DataFrame
# print(df.tail()) # prints the last 5 rows of the DataFrame
# print(df.columns) # prints the columns of the DataFrame
# print(df.index) # prints the index of the DataFrame
# Questions:
# What part of the data set needs to be cleaned?
# From PBL learning, what is a good time to clean data?
# Could you hav Garbage in, Garbage out problem if you don't clean the data?
Student ID Year in School GPA
0 123 12 3.57
1 246 10 4.00
2 578 12 2.78
3 469 11 3.45
4 324 Junior 4.75
5 313 20 3.33
6 145 12 2.95
7 167 10 3.90
8 235 9th Grade 3.15
9 nil 9 2.80
10 469 11 3.45
11 456 10 2.75
Extracting Info
Take a look at some features that the Pandas library has that extracts info from the dataset
DataFrame Extract Column
#print the values in the points column with column header
print(df[['GPA']])
print()
#try two columns and remove the index from print statement
print(df[['Student ID','GPA']].to_string(index=False))
GPA
0 3.57
1 4.00
2 2.78
3 3.45
4 4.75
5 3.33
6 2.95
7 3.90
8 3.15
9 2.80
10 3.45
11 2.75
Student ID GPA
123 3.57
246 4.00
578 2.78
469 3.45
324 4.75
313 3.33
145 2.95
167 3.90
235 3.15
nil 2.80
469 3.45
456 2.75
DataFrame Sort
#sort values
print(df.sort_values(by=['GPA']))
print()
#sort the values in reverse order
print(df.sort_values(by=['GPA'], ascending=False))
Student ID Year in School GPA
11 456 10 2.75
2 578 12 2.78
9 nil 9 2.80
6 145 12 2.95
8 235 9th Grade 3.15
5 313 20 3.33
10 469 11 3.45
3 469 11 3.45
0 123 12 3.57
7 167 10 3.90
1 246 10 4.00
4 324 Junior 4.75
Student ID Year in School GPA
4 324 Junior 4.75
1 246 10 4.00
7 167 10 3.90
0 123 12 3.57
10 469 11 3.45
3 469 11 3.45
5 313 20 3.33
8 235 9th Grade 3.15
6 145 12 2.95
9 nil 9 2.80
2 578 12 2.78
11 456 10 2.75
DataFrame Selection or Filter
#print only values with a specific criteria
print(df[df.GPA > 3.00])
Student ID Year in School GPA
0 123 12 3.57
1 246 10 4.00
3 469 11 3.45
4 324 Junior 4.75
5 313 20 3.33
7 167 10 3.90
8 235 9th Grade 3.15
10 469 11 3.45
DataFrame Selection Max and Min
print(df[df.GPA == df.GPA.max()])
print()
print(df[df.GPA == df.GPA.min()])
Student ID Year in School GPA
4 324 Junior 4.75
Student ID Year in School GPA
11 456 10 2.75
Create your own DataFrame
Using Pandas allows you to create your own DataFrame in Python.
Python Dictionary to Pandas DataFrame
import pandas as pd
#the data can be stored as a python dictionary
dict = {
"calories": [420, 380, 390],
"duration": [50, 40, 45]
}
print("-------------Dictionary------------------")
print(dict)
#stores the data in a data frame
print("-------------Dict_to_DF------------------")
df = pd.DataFrame(dict)
print(df)
print("----------Dict_to_DF_labels--------------")
#or with the index argument, you can label rows.
df = pd.DataFrame(dict, index = ["day1", "day2", "day3"])
print(df)
-------------Dictionary------------------
{'calories': [420, 380, 390], 'duration': [50, 40, 45]}
-------------Dict_to_DF------------------
calories duration
0 420 50
1 380 40
2 390 45
----------Dict_to_DF_labels--------------
calories duration
day1 420 50
day2 380 40
day3 390 45
Examine DataFrame Rows
print("-------Examine Selected Rows---------")
#use a list for multiple labels:
print(df.loc[["day1", "day3"]])
#refer to the row index:
print("--------Examine Single Row-----------")
print(df.loc["day1"])
-------Examine Selected Rows---------
calories duration
day1 420 50
day3 390 45
--------Examine Single Row-----------
calories 420
duration 50
Name: day1, dtype: int64
Pandas DataFrame Information
#print info about the data set
print(df.info())
<class 'pandas.core.frame.DataFrame'>
Index: 3 entries, day1 to day3
Data columns (total 2 columns):
# Column Non-Null Count Dtype
--- ------ -------------- -----
0 calories 3 non-null int64
1 duration 3 non-null int64
dtypes: int64(2)
memory usage: 180.0+ bytes
None
Example of larger data set
Pandas can read CSV and many other types of files, run the following code to see more features with a larger data set
import pandas as pd
#read csv and sort 'Duration' largest to smallest
df = pd.read_csv('files/data.csv').sort_values(by=['Duration'], ascending=False)
print("--Duration Top 10---------")
print(df.head(10))
print("--Duration Bottom 10------")
print(df.tail(10))
--Duration Top 10---------
Duration Pulse Maxpulse Calories
69 300 108 143 1500.2
79 270 100 131 1729.0
60 210 108 160 1376.0
109 210 137 184 1860.4
65 180 90 130 800.4
90 180 101 127 600.1
106 180 90 120 800.3
61 160 110 137 1034.4
62 160 109 135 853.0
70 150 97 129 1115.0
--Duration Bottom 10------
Duration Pulse Maxpulse Calories
100 20 95 112 77.7
89 20 83 107 50.3
58 20 153 172 226.4
139 20 141 162 222.4
95 20 151 168 229.4
68 20 106 136 110.4
135 20 136 156 189.0
64 20 110 130 131.4
93 15 80 100 50.5
112 15 124 139 124.2
APIs are a Source for Panda Data
3rd Party APIs are a great source for creating Pandas Data Frames.
- Data can be fetched and resulting json can be placed into a Data Frame
- Observe output, this looks very similar to a Database
import pandas as pd
import requests
def fetch():
'''Obtain data from an endpoint'''
url = "https://devops.nighthawkcodingsociety.com/api/users/"
fetch = requests.get(url)
json = fetch.json()
# filter data for requirement
df = pd.DataFrame(json)
# Check if 'active_classes' column exists in the DataFrame
if 'active_classes' in df.columns:
# Split the 'active_classes' strings into lists of class names and expand the lists into separate rows
classes_series = df['active_classes'].str.split(',').explode()
# Count the unique class names and print the counts
print(classes_series.str.strip().value_counts())
else:
print("Column 'active_classes' does not exist in the DataFrame")
fetch()
active_classes
APCSP 161
APCSA 61
CSSE 60
20
Name: count, dtype: int64
import pandas as pd
import requests
def fetch():
'''Obtain data from an endpoint'''
url = "https://devops.nighthawkcodingsociety.com/api/users/"
fetch = requests.get(url)
json = fetch.json()
# filter data for requirement
df = pd.DataFrame(json)
# Check if 'active_classes' column exists in the DataFrame
if 'active_classes' in df.columns:
# Split the 'active_classes' strings into lists of class names
df['active_classes'] = df['active_classes'].str.split(',')
# Get a list of unique class names by using a set comprehension
unique_classes = pd.Series([unique_class.strip() for class_list in df['active_classes'] for unique_class in class_list]).unique()
# Iterate over the each class name
for current_class in unique_classes:
# Filter the DataFrame for students in the current class using a lambda function
class_df = df[df['active_classes'].apply(lambda classes: current_class in classes)]
# Select the desired data frame column
students = class_df[['active_classes','id', 'first_name', 'last_name']]
# Print the list of students in the current class
print(students.sort_values(by='last_name').head()) # avoids jupyter notebook truncation, remove .head() to print all students
print()
else:
print("Column 'active_classes' does not exist in the DataFrame")
fetch()
active_classes id first_name last_name
60 [APCSA] 86 Aditya
33 [APCSA] 55 Finn
30 [APCSA] 52 [Edwin] Abraham
248 [APCSA] 316 [Vishnu] Aravind
118 [APCSA] 161 [Anthony] Bazhenov
active_classes id first_name last_name
299 [APCSP] 369 Test
94 [APCSP] 134 Cindy
297 [APCSP] 367 testUser
12 [APCSP] 29 Saaras
151 [APCSP] 199 Gavin
active_classes id first_name last_name
264 [] 334 Pele
255 [] 325 Pele
162 [] 212 Varnika
194 [] 246 [Alyssa-Allen] Abrams
259 [] 329 [Alexander, Graham] Bell
active_classes id first_name last_name
287 [CSSE] 357 Amelia
206 [CSSE] 260 Gabriel
266 [CSSE] 336 Yoseph
212 [CSSE] 267 Timur
91 [CSSE] 130 [Maryam] Abdul-Aziz
Hacks
Early Seed award. Don’t tell anyone. Show to Teacher.
- Add this Blog to you own Blogging site.
- Have all lecture files saved to your files directory before Tech Talk starts.
- Add this Blog to you own Blogging site. In the Blog add notes and observations on each code cell.
The next 6 weeks, the Teachers want you to improve your understanding of data structures and data science. Your intention is to find some things to differentiate your individual College Board project, particularly if your project looks like all other projects.
- Look at this blog and others on data structures for todays date.
- Create or Find your own dataset. The suggestion is to use a JSON file, integrating with your CPT/PBL project would be Amazing.
- Build frontend to backend to filter or use your data set in your CPT/PBL.
- When choosing a data set, think about the following…
- Does it have a good sample size?
- Is there bias in the data?
- Does the data set need to be cleaned?
- What is the purpose of the data set?
- …